Curator Dashboard

Software tool for predicting TS and risk from glioblastoma whole slide images. Used to predict risk scores and transcriptional subtypes from whole slide images of glioblastomas.

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• 1 week ago - submitted by Thomas Roetzer-Pejrimovsky

Web browser-based JavaScript application for visualizing hierarchical cellular populations as interactive radial tree. Allows users to explore, filter, and manipulate hierarchical data structures through intuitive interface while also enabling batch export of high-quality custom graphics.

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• 1 week ago - submitted by Conor Klamann

Core provides Sanger sequencing and fragment analysis via capillary electrophoresis. Expected turnaround time is within 2 business days of order receipt.

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• 1 week ago - submitted by Edyta Vieth

Algorithm for generating unique study identifiers in distributed and validatable fashion, in multicenter research. Light-weight, block chain style resource identifier generation for tracking resource linkage, provenance, utilization, and visualization. NHash has unique set of properties: (1) it is a pseudonym serving the purpose of linking research data about study participant for research purposes; (2) it can be generated automatically in completely distributed fashion with virtually no risk for identifier collision; (3) it incorporates set of cryptographic hash functions based on N-grams, with combination of additional encryption techniques such as shift cipher; (d) it is validatable (error tolerant) in the sense that inadvertent edit errors will mostly result in invalid identifiers.

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• 1 week ago - submitted by Guo-Qiang Zhang

Standalone program and library to plot beautiful genome browser tracks. Software Python plotting tool that combines multiple tracks. Enables reproducible and standardized generation of highly customizable and publication ready images.

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• 1 week ago - by Anonymous

Software graphical tool to allow easy editing of (XML) model, create initial positions of cells, run simulation, and visualize results. To contribute, fork and make PRs to the development branch. Used to create, execute, and visualize multicellular model using PhysiCell.

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• 1 week ago - by Anonymous

IBT Flow Cytometry and Cell Sorting Facility provides flow cytometry and cell sorting services, along with scientific expertise. Provides academic and commercial users with access to High Throughput Flow Cytometry automated platform in Texas Medical Center.

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• 1 week ago - submitted by Edyta Vieth

Research Informatics Core at University of Illinois-Chicago provides bioinformatics services including genomics, transcriptomics, epigenomics, metagenomics, metabolomics, and proteomics analysis, as well as applications in statistical analysis, systems biology, and machine learning.

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• 1 week ago - submitted by Edyta Vieth

Multi-purpose core research facility with sub-cores. Genetics, Analytical, Autoclave and Cell Culture Cores. Genetics Core provides Next Generation Sequencing, DNA/RNA and protein quantitation, nucleic acid QC, Real-Time PCR, and Droplet Digital PCR. Analytical Core houses analytical instruments such as UV-Vis, nanoparticle analyzers and plate readers. Some basic molecular biology equipment are also available. Cell Culture Core for researchers who need access to BSL1/BSL2 cell culture facility. Also includes autoclaves or labware sterilization and biohazardous waste disposal.

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• SciCrunch
• 1 week ago - submitted by Edyta Vieth

Research core laboratory within Center for Computational and Integrative Biology at Massachusetts General Hospital in Boston. Provides access to instrumentation, methodologies and expertise Services include Sanger DNA sequencing,Next Generation Sequencing, Long read Sequencing, genotyping, laboratory automation, molecular biology.

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• SciCrunch
• 1 week ago - submitted by Edyta Vieth

Software Python library that aims to complement existing network analysis libraries such as networkx, igraph, and graph-tool with publication-quality visualisations within the Python ecosystem. Publication-quality Network Visualisations in Python.

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• 2 weeks ago - by Anonymous

Software Python library for Gene Ontology analysis. Performs gene ontology enrichment analyses to determine over- and under-represented terms.

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• 2 weeks ago - by Anonymous

Software Python package for DIA with automated isolation design. Used for Data-Independent Acquisition providing Automated Isolation Design. Optimally generates dia-PASEF and synchro-PASEF methods and places them optimally within the m/z – ion mobility (IM) plane.

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• 2 weeks ago - by Anonymous

Compact stereotaxic instrument designed for use with knock-out and transgenic mice. Instrument includes 100 micron, 3-axes left-hand manipulator arm, mouse snout clamp and tooth bar, dual-sided ear bars, and corner clamp probe holder. Stoelting’s Motorized Stereotaxic Manipulator Arms are designed for fast, accurate positioning during stereotaxic surgery. Motorized manipulator arms employ touchscreen display for easy-to-control movement of each axis. Manual movement is available anytime. Optional Drill feature available.

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• 2 weeks ago - by Anonymous

Bruker BioSpec preclinical MRI equipment at translational field of 3 Tesla, extends the range of multi-purpose, preclinical MRI and MRS systems in compact, easy to site footprint.

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• 2 weeks ago - by Anonymous

Supports users in application of numerous radiological methods such as ultrasound, optical imaging, µPET, µCT, µSPECT and MRT measurements to collect and quantify morphological and functional data in vivo.

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• 2 weeks ago - by Anonymous

Software R package to draw venn diagram by ggplot2.

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• 2 weeks ago - by Anonymous

Functional annotation database of human fusion genes.FusionGDB 2.0 has updates of contents such as up-to-date human fusion genes, fusion gene breakage tendency score with FusionAI deep learning model based on 20 kb DNA sequence around BP, investigation of overlapping between fusion breakpoints with human genomic features across cellular role's categories, transcribed chimeric sequence and following open reading frame analysis with coding potential based on deep learning approach with Ribo-seq read features, and rigorous investigation of protein feature retention of individual fusion partner genes in protein level.

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• 2 weeks ago - by Anonymous

Two-in-one programmable power supple capable of handling high voltage/low current and high current/low voltage applications concurrently and independently. The high voltage/low current section is ideal for sample fractionation, IPG strips, IEF, and DNA sequencing applications while the low voltage/high current section is for SDS-PAGE, native PAGE, second-dimension SDS-PAGE, DNA/RNA electrophoresis, and blotting applications.

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• 2 weeks ago - submitted by Brianna Miller

Refrigerated centrifuge that generates centrifugal forces required for wide variety of applications. Together with Beckman Coulter rotors are designed for use in this centrifuge. Centrifuge is microprocessor controlled, providing interactive operation.

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• 2 weeks ago - submitted by Brianna Miller